Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RxrbP28704 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RxrbP28704 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
RxrbP28704 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RxrbP28704 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
RxrbP28704 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.72□□□□□ -0.53
RxrbP28704 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
RxrbP28704 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.72□□□□□ -0.53
RxrbP28704 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.72□□□□□ -0.53
RxrbP28704 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.72□□□□□ -0.53
RxrbP28704 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.72□□□□□ -0.53
RxrbP28704 Gm2546-201ENSMUST00000182630 991 ntBASIC11.72□□□□□ -0.53
RxrbP28704 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.72□□□□□ -0.53
RxrbP28704 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RxrbP28704 Gm42627-201ENSMUST00000197347 224 ntBASIC11.72□□□□□ -0.53
RxrbP28704 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC11.72□□□□□ -0.53
RxrbP28704 Gm43966-201ENSMUST00000203301 612 ntBASIC11.72□□□□□ -0.53
RxrbP28704 Gm19324-201ENSMUST00000213229 1169 ntBASIC11.72□□□□□ -0.53
RxrbP28704 Gm19309-201ENSMUST00000218295 205 ntBASIC11.72□□□□□ -0.53
RxrbP28704 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.72□□□□□ -0.53
RxrbP28704 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RxrbP28704 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
RxrbP28704 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
RxrbP28704 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RxrbP28704 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RxrbP28704 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RxrbP28704 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
RxrbP28704 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
RxrbP28704 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RxrbP28704 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RxrbP28704 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.72□□□□□ -0.53
RxrbP28704 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RxrbP28704 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RxrbP28704 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RxrbP28704 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RxrbP28704 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RxrbP28704 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
RxrbP28704 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
RxrbP28704 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
RxrbP28704 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
RxrbP28704 Gm45828-201ENSMUST00000206938 1836 ntBASIC11.72□□□□□ -0.53
RxrbP28704 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RxrbP28704 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
RxrbP28704 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RxrbP28704 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
RxrbP28704 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RxrbP28704 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
RxrbP28704 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.71□□□□□ -0.53
RxrbP28704 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
RxrbP28704 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RxrbP28704 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
RxrbP28704 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
RxrbP28704 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
RxrbP28704 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.71□□□□□ -0.53
RxrbP28704 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RxrbP28704 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RxrbP28704 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RxrbP28704 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.53
RxrbP28704 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RxrbP28704 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.71□□□□□ -0.53
RxrbP28704 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RxrbP28704 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RxrbP28704 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
RxrbP28704 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.71□□□□□ -0.53
RxrbP28704 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.71□□□□□ -0.53
RxrbP28704 Gm43433-201ENSMUST00000196573 481 ntBASIC11.71□□□□□ -0.53
RxrbP28704 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RxrbP28704 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
RxrbP28704 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.71□□□□□ -0.53
RxrbP28704 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.71□□□□□ -0.53
RxrbP28704 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RxrbP28704 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
RxrbP28704 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
RxrbP28704 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
RxrbP28704 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
RxrbP28704 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RxrbP28704 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RxrbP28704 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.71□□□□□ -0.54
RxrbP28704 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
RxrbP28704 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RxrbP28704 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
RxrbP28704 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
RxrbP28704 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RxrbP28704 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RxrbP28704 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
RxrbP28704 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
RxrbP28704 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RxrbP28704 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RxrbP28704 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RxrbP28704 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.71□□□□□ -0.54
RxrbP28704 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
RxrbP28704 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.71□□□□□ -0.54
RxrbP28704 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
RxrbP28704 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RxrbP28704 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.7□□□□□ -0.54
RxrbP28704 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
RxrbP28704 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
RxrbP28704 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RxrbP28704 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
RxrbP28704 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms