Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afxP27661 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC12.12□□□□□ -0.47
H2afxP27661 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afxP27661 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afxP27661 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afxP27661 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
H2afxP27661 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.12□□□□□ -0.47
H2afxP27661 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H2afxP27661 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.12□□□□□ -0.47
H2afxP27661 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afxP27661 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afxP27661 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
H2afxP27661 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.12□□□□□ -0.47
H2afxP27661 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.12□□□□□ -0.47
H2afxP27661 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afxP27661 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afxP27661 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afxP27661 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC12.12□□□□□ -0.47
H2afxP27661 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
H2afxP27661 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.12□□□□□ -0.47
H2afxP27661 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afxP27661 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afxP27661 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afxP27661 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afxP27661 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afxP27661 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afxP27661 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H2afxP27661 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.11□□□□□ -0.47
H2afxP27661 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H2afxP27661 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.11□□□□□ -0.47
H2afxP27661 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H2afxP27661 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afxP27661 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
H2afxP27661 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
H2afxP27661 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afxP27661 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afxP27661 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afxP27661 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC12.11□□□□□ -0.47
H2afxP27661 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC12.11□□□□□ -0.47
H2afxP27661 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H2afxP27661 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H2afxP27661 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
H2afxP27661 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.11□□□□□ -0.47
H2afxP27661 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.11□□□□□ -0.47
H2afxP27661 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H2afxP27661 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.11□□□□□ -0.47
H2afxP27661 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.11□□□□□ -0.47
H2afxP27661 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.11□□□□□ -0.47
H2afxP27661 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.11□□□□□ -0.47
H2afxP27661 Gm32111-201ENSMUST00000207689 846 ntBASIC12.11□□□□□ -0.47
H2afxP27661 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.11□□□□□ -0.47
H2afxP27661 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afxP27661 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afxP27661 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H2afxP27661 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afxP27661 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H2afxP27661 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
H2afxP27661 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afxP27661 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afxP27661 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afxP27661 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H2afxP27661 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
H2afxP27661 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afxP27661 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afxP27661 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.11□□□□□ -0.47
H2afxP27661 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afxP27661 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afxP27661 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H2afxP27661 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afxP27661 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afxP27661 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC12.1□□□□□ -0.47
H2afxP27661 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afxP27661 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
H2afxP27661 Gm12151-201ENSMUST00000121374 290 ntBASIC12.1□□□□□ -0.47
H2afxP27661 Gm11594-201ENSMUST00000122313 162 ntBASIC12.1□□□□□ -0.47
H2afxP27661 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.1□□□□□ -0.47
H2afxP27661 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H2afxP27661 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.1□□□□□ -0.47
H2afxP27661 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.1□□□□□ -0.47
H2afxP27661 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afxP27661 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afxP27661 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afxP27661 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afxP27661 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.1□□□□□ -0.47
H2afxP27661 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afxP27661 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afxP27661 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afxP27661 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afxP27661 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afxP27661 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afxP27661 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afxP27661 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC12.1□□□□□ -0.47
H2afxP27661 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
H2afxP27661 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afxP27661 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H2afxP27661 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afxP27661 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.1□□□□□ -0.47
H2afxP27661 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
H2afxP27661 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
H2afxP27661 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms