Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm12613-201ENSMUST00000180323 382 ntBASIC9.73□□□□□ -0.85
Col8a2P25318 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Col8a2P25318 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC9.73□□□□□ -0.85
Col8a2P25318 Gm44329-201ENSMUST00000197469 112 ntBASIC9.73□□□□□ -0.85
Col8a2P25318 Gm17825-201ENSMUST00000206836 794 ntBASIC9.73□□□□□ -0.85
Col8a2P25318 Gm2553-201ENSMUST00000215986 605 ntBASIC9.73□□□□□ -0.85
Col8a2P25318 Gm18556-201ENSMUST00000219748 1031 ntBASIC9.73□□□□□ -0.85
Col8a2P25318 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col8a2P25318 Gm18974-201ENSMUST00000221478 1031 ntBASIC9.73□□□□□ -0.85
Col8a2P25318 AC134860.1-201ENSMUST00000224867 660 ntBASIC9.73□□□□□ -0.85
Col8a2P25318 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col8a2P25318 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col8a2P25318 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC9.73□□□□□ -0.85
Col8a2P25318 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col8a2P25318 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col8a2P25318 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
Col8a2P25318 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col8a2P25318 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Col8a2P25318 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Col8a2P25318 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col8a2P25318 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col8a2P25318 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Col8a2P25318 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC9.73□□□□□ -0.85
Col8a2P25318 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Col8a2P25318 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Col8a2P25318 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.73□□□□□ -0.85
Col8a2P25318 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col8a2P25318 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col8a2P25318 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col8a2P25318 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col8a2P25318 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Col8a2P25318 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Col8a2P25318 AC157950.1-201ENSMUST00000217561 2168 ntBASIC9.73□□□□□ -0.85
Col8a2P25318 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Col8a2P25318 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC9.72□□□□□ -0.85
Col8a2P25318 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 Gm45199-201ENSMUST00000207640 1507 ntBASIC9.72□□□□□ -0.85
Col8a2P25318 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC9.72□□□□□ -0.85
Col8a2P25318 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 Arhgef3-204ENSMUST00000225949 3198 ntBASIC9.72□□□□□ -0.85
Col8a2P25318 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 AC154639.1-201ENSMUST00000224393 2849 ntBASIC9.72□□□□□ -0.85
Col8a2P25318 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Col8a2P25318 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.72□□□□□ -0.85
Col8a2P25318 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Col8a2P25318 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 Gm15352-201ENSMUST00000118696 270 ntBASIC9.72□□□□□ -0.85
Col8a2P25318 Gm16071-201ENSMUST00000119589 793 ntBASIC9.72□□□□□ -0.85
Col8a2P25318 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC9.72□□□□□ -0.85
Col8a2P25318 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC9.72□□□□□ -0.85
Col8a2P25318 Mir7032-201ENSMUST00000185154 79 ntBASIC9.72□□□□□ -0.85
Col8a2P25318 Gm17826-201ENSMUST00000189720 798 ntBASIC9.72□□□□□ -0.85
Col8a2P25318 Gm37299-201ENSMUST00000193951 826 ntBASIC9.72□□□□□ -0.85
Col8a2P25318 Gm38314-201ENSMUST00000195709 625 ntBASIC9.72□□□□□ -0.85
Col8a2P25318 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC9.72□□□□□ -0.85
Col8a2P25318 Gm19817-201ENSMUST00000199764 2132 ntBASIC9.72□□□□□ -0.85
Col8a2P25318 Gm8574-201ENSMUST00000203207 924 ntBASIC9.72□□□□□ -0.85
Col8a2P25318 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC9.72□□□□□ -0.85
Col8a2P25318 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 Snora73b-201ENSMUST00000083419 205 ntBASIC9.72□□□□□ -0.85
Col8a2P25318 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Col8a2P25318 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC9.72□□□□□ -0.85
Col8a2P25318 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
Col8a2P25318 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Col8a2P25318 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col8a2P25318 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Col8a2P25318 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Col8a2P25318 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Col8a2P25318 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Col8a2P25318 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Col8a2P25318 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.85
Col8a2P25318 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.85
Col8a2P25318 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Col8a2P25318 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Col8a2P25318 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Col8a2P25318 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms