Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Pdlim1O70400 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Pdlim1O70400 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Gm12579-201ENSMUST00000118040 783 ntBASIC11.57□□□□□ -0.56
Pdlim1O70400 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.57□□□□□ -0.56
Pdlim1O70400 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.57□□□□□ -0.56
Pdlim1O70400 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Pdlim1O70400 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Pdlim1O70400 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Pdlim1O70400 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.57□□□□□ -0.56
Pdlim1O70400 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.57□□□□□ -0.56
Pdlim1O70400 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.57□□□□□ -0.56
Pdlim1O70400 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.57□□□□□ -0.56
Pdlim1O70400 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Pdlim1O70400 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Pdlim1O70400 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Pdlim1O70400 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Pdlim1O70400 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Pdlim1O70400 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Pdlim1O70400 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.57□□□□□ -0.56
Pdlim1O70400 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Pdlim1O70400 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Pdlim1O70400 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim1O70400 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim1O70400 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim1O70400 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim1O70400 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim1O70400 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.56□□□□□ -0.56
Pdlim1O70400 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim1O70400 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim1O70400 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim1O70400 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Pdlim1O70400 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim1O70400 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim1O70400 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Pdlim1O70400 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim1O70400 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Pdlim1O70400 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Pdlim1O70400 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Pdlim1O70400 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.56□□□□□ -0.56
Pdlim1O70400 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.56□□□□□ -0.56
Pdlim1O70400 Mir7070-201ENSMUST00000183657 86 ntBASIC11.56□□□□□ -0.56
Pdlim1O70400 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.56□□□□□ -0.56
Pdlim1O70400 Gm9540-201ENSMUST00000188230 478 ntBASIC11.56□□□□□ -0.56
Pdlim1O70400 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.56□□□□□ -0.56
Pdlim1O70400 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.56□□□□□ -0.56
Pdlim1O70400 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.56□□□□□ -0.56
Pdlim1O70400 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim1O70400 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Pdlim1O70400 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.56□□□□□ -0.56
Pdlim1O70400 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Pdlim1O70400 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.56□□□□□ -0.56
Pdlim1O70400 Gm1821-202ENSMUST00000227415 750 ntBASIC11.56□□□□□ -0.56
Pdlim1O70400 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim1O70400 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim1O70400 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim1O70400 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Pdlim1O70400 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Pdlim1O70400 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Pdlim1O70400 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim1O70400 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Pdlim1O70400 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim1O70400 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim1O70400 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.56□□□□□ -0.56
Pdlim1O70400 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim1O70400 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.56□□□□□ -0.56
Pdlim1O70400 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.55□□□□□ -0.56
Pdlim1O70400 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms