Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chrna4O70174 Gm29199-201ENSMUST00000187766 775 ntBASIC11.76□□□□□ -0.53
Chrna4O70174 Gm5733-201ENSMUST00000190232 939 ntBASIC11.76□□□□□ -0.53
Chrna4O70174 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.76□□□□□ -0.53
Chrna4O70174 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chrna4O70174 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Chrna4O70174 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chrna4O70174 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chrna4O70174 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chrna4O70174 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Chrna4O70174 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chrna4O70174 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Chrna4O70174 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chrna4O70174 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chrna4O70174 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chrna4O70174 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chrna4O70174 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chrna4O70174 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chrna4O70174 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chrna4O70174 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chrna4O70174 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chrna4O70174 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Chrna4O70174 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Chrna4O70174 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chrna4O70174 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Chrna4O70174 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Chrna4O70174 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chrna4O70174 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chrna4O70174 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chrna4O70174 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chrna4O70174 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chrna4O70174 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chrna4O70174 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Chrna4O70174 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Chrna4O70174 Gm7857-201ENSMUST00000117957 358 ntBASIC11.75□□□□□ -0.53
Chrna4O70174 Gm13461-201ENSMUST00000120980 662 ntBASIC11.75□□□□□ -0.53
Chrna4O70174 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.75□□□□□ -0.53
Chrna4O70174 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.75□□□□□ -0.53
Chrna4O70174 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Chrna4O70174 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Chrna4O70174 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.75□□□□□ -0.53
Chrna4O70174 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chrna4O70174 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.75□□□□□ -0.53
Chrna4O70174 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chrna4O70174 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chrna4O70174 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.75□□□□□ -0.53
Chrna4O70174 Gm5369-201ENSMUST00000217499 588 ntBASIC11.75□□□□□ -0.53
Chrna4O70174 Gm18065-201ENSMUST00000221395 526 ntBASIC11.75□□□□□ -0.53
Chrna4O70174 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Chrna4O70174 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Chrna4O70174 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chrna4O70174 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chrna4O70174 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Chrna4O70174 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chrna4O70174 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chrna4O70174 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chrna4O70174 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chrna4O70174 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.75□□□□□ -0.53
Chrna4O70174 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chrna4O70174 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chrna4O70174 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.75□□□□□ -0.53
Chrna4O70174 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.75□□□□□ -0.53
Chrna4O70174 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chrna4O70174 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chrna4O70174 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chrna4O70174 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chrna4O70174 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chrna4O70174 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chrna4O70174 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chrna4O70174 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chrna4O70174 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Chrna4O70174 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Chrna4O70174 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Chrna4O70174 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.74□□□□□ -0.53
Chrna4O70174 Gm14071-201ENSMUST00000117817 509 ntBASIC11.74□□□□□ -0.53
Chrna4O70174 Gm12579-201ENSMUST00000118040 783 ntBASIC11.74□□□□□ -0.53
Chrna4O70174 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.74□□□□□ -0.53
Chrna4O70174 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chrna4O70174 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.74□□□□□ -0.53
Chrna4O70174 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.74□□□□□ -0.53
Chrna4O70174 Mir6927-201ENSMUST00000184494 71 ntBASIC11.74□□□□□ -0.53
Chrna4O70174 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chrna4O70174 Gm38151-201ENSMUST00000195085 289 ntBASIC11.74□□□□□ -0.53
Chrna4O70174 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.74□□□□□ -0.53
Chrna4O70174 Gm4482-201ENSMUST00000200876 742 ntBASIC11.74□□□□□ -0.53
Chrna4O70174 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chrna4O70174 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chrna4O70174 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chrna4O70174 Gm10254-201ENSMUST00000052888 867 ntBASIC11.74□□□□□ -0.53
Chrna4O70174 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chrna4O70174 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chrna4O70174 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chrna4O70174 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chrna4O70174 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chrna4O70174 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chrna4O70174 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Chrna4O70174 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Chrna4O70174 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chrna4O70174 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chrna4O70174 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms