Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ldb2O55203 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ldb2O55203 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Ldb2O55203 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Ldb2O55203 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Ldb2O55203 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ldb2O55203 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ldb2O55203 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ldb2O55203 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ldb2O55203 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Ldb2O55203 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ldb2O55203 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Ldb2O55203 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Ldb2O55203 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ldb2O55203 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.59□□□□□ -0.55
Ldb2O55203 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.59□□□□□ -0.55
Ldb2O55203 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ldb2O55203 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ldb2O55203 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.59□□□□□ -0.55
Ldb2O55203 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ldb2O55203 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ldb2O55203 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ldb2O55203 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ldb2O55203 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ldb2O55203 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ldb2O55203 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ldb2O55203 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ldb2O55203 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ldb2O55203 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ldb2O55203 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ldb2O55203 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ldb2O55203 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.58□□□□□ -0.56
Ldb2O55203 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ldb2O55203 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Ldb2O55203 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Ldb2O55203 Gm7851-201ENSMUST00000117574 323 ntBASIC11.58□□□□□ -0.56
Ldb2O55203 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.58□□□□□ -0.56
Ldb2O55203 Gm13263-201ENSMUST00000121271 838 ntBASIC11.58□□□□□ -0.56
Ldb2O55203 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.58□□□□□ -0.56
Ldb2O55203 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.58□□□□□ -0.56
Ldb2O55203 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.58□□□□□ -0.56
Ldb2O55203 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.58□□□□□ -0.56
Ldb2O55203 Gm10807-201ENSMUST00000177134 795 ntBASIC11.58□□□□□ -0.56
Ldb2O55203 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.58□□□□□ -0.56
Ldb2O55203 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.58□□□□□ -0.56
Ldb2O55203 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.58□□□□□ -0.56
Ldb2O55203 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.58□□□□□ -0.56
Ldb2O55203 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.58□□□□□ -0.56
Ldb2O55203 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.58□□□□□ -0.56
Ldb2O55203 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.58□□□□□ -0.56
Ldb2O55203 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ldb2O55203 Gm5369-201ENSMUST00000217499 588 ntBASIC11.58□□□□□ -0.56
Ldb2O55203 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.58□□□□□ -0.56
Ldb2O55203 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ldb2O55203 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Ldb2O55203 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.58□□□□□ -0.56
Ldb2O55203 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.58□□□□□ -0.56
Ldb2O55203 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.58□□□□□ -0.56
Ldb2O55203 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ldb2O55203 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ldb2O55203 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ldb2O55203 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ldb2O55203 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.57□□□□□ -0.56
Ldb2O55203 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ldb2O55203 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ldb2O55203 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ldb2O55203 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.57□□□□□ -0.56
Ldb2O55203 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ldb2O55203 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ldb2O55203 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ldb2O55203 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ldb2O55203 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ldb2O55203 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms