Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Gm5419-201ENSMUST00000119301 527 ntBASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Gm11918-201ENSMUST00000121660 179 ntBASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Gm6439-201ENSMUST00000199849 862 ntBASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Gm7067-201ENSMUST00000207698 1249 ntBASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Gm42427-201ENSMUST00000200473 5292 ntBASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 AC154171.2-201ENSMUST00000225219 2652 ntBASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Gm12887B1AVM1 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Gm12887B1AVM1 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Gm12887B1AVM1 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Gm12887B1AVM1 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Gm12887B1AVM1 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Gm12887B1AVM1 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Gm12887B1AVM1 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Gm12887B1AVM1 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Gm12887B1AVM1 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Gm12887B1AVM1 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.4□□□□□ -0.91
Gm12887B1AVM1 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Gm12887B1AVM1 Gm5703-201ENSMUST00000186658 3973 ntBASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC9.39□□□□□ -0.91
Gm12887B1AVM1 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Gm12164-201ENSMUST00000121695 551 ntBASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Gm27486-201ENSMUST00000184923 80 ntBASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Gm42442-201ENSMUST00000197951 1133 ntBASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Tyms-ps-201ENSMUST00000219550 915 ntBASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms