Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd6A3KFM7 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC9.38□□□□□ -0.91
Chd6A3KFM7 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Gm23908-201ENSMUST00000104599 132 ntBASIC9.38□□□□□ -0.91
Chd6A3KFM7 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Gm25145-201ENSMUST00000177640 110 ntBASIC9.38□□□□□ -0.91
Chd6A3KFM7 n-R5s130-201ENSMUST00000178128 119 ntBASIC9.38□□□□□ -0.91
Chd6A3KFM7 Gm24312-201ENSMUST00000178677 119 ntBASIC9.38□□□□□ -0.91
Chd6A3KFM7 n-R5s106-201ENSMUST00000179060 119 ntBASIC9.38□□□□□ -0.91
Chd6A3KFM7 n-R5s118-201ENSMUST00000179887 119 ntBASIC9.38□□□□□ -0.91
Chd6A3KFM7 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Gm9369-201ENSMUST00000196009 733 ntBASIC9.38□□□□□ -0.91
Chd6A3KFM7 Gm42660-201ENSMUST00000197733 947 ntBASIC9.38□□□□□ -0.91
Chd6A3KFM7 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC9.38□□□□□ -0.91
Chd6A3KFM7 AC163038.2-201ENSMUST00000224851 650 ntBASIC9.38□□□□□ -0.91
Chd6A3KFM7 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Chd6A3KFM7 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Gm8038-201ENSMUST00000164674 2044 ntBASIC9.38□□□□□ -0.91
Chd6A3KFM7 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Ighv1-22-201ENSMUST00000103507 351 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Gm11951-201ENSMUST00000116005 431 ntBASIC9.38□□□□□ -0.91
Chd6A3KFM7 Gm12397-201ENSMUST00000117674 615 ntBASIC9.38□□□□□ -0.91
Chd6A3KFM7 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Gm7741-201ENSMUST00000181445 989 ntBASIC9.38□□□□□ -0.91
Chd6A3KFM7 Gm5845-201ENSMUST00000195812 796 ntBASIC9.38□□□□□ -0.91
Chd6A3KFM7 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd6A3KFM7 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Gm2420-201ENSMUST00000119864 2149 ntBASIC9.37□□□□□ -0.91
Chd6A3KFM7 Gm37348-201ENSMUST00000193104 1789 ntBASIC9.37□□□□□ -0.91
Chd6A3KFM7 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 AC151895.1-201ENSMUST00000219025 1742 ntBASIC9.37□□□□□ -0.91
Chd6A3KFM7 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Gm8659-201ENSMUST00000120024 1084 ntBASIC9.37□□□□□ -0.91
Chd6A3KFM7 Gm15197-201ENSMUST00000120526 478 ntBASIC9.37□□□□□ -0.91
Chd6A3KFM7 Gm8163-201ENSMUST00000122020 1060 ntBASIC9.37□□□□□ -0.91
Chd6A3KFM7 Gm25804-201ENSMUST00000122785 188 ntBASIC9.37□□□□□ -0.91
Chd6A3KFM7 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Gm6291-201ENSMUST00000179994 309 ntBASIC9.37□□□□□ -0.91
Chd6A3KFM7 Gm7445-201ENSMUST00000192115 340 ntBASIC9.37□□□□□ -0.91
Chd6A3KFM7 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Gm3198-201ENSMUST00000208725 1026 ntBASIC9.37□□□□□ -0.91
Chd6A3KFM7 AC133496.1-201ENSMUST00000223891 743 ntBASIC9.37□□□□□ -0.91
Chd6A3KFM7 AC122035.1-201ENSMUST00000227576 1016 ntBASIC9.37□□□□□ -0.91
Chd6A3KFM7 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms