Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trim39Q9ESN2 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trim39Q9ESN2 Gm26956-201ENSMUST00000182176 986 ntBASIC11.05□□□□□ -0.64
Trim39Q9ESN2 Gm28882-201ENSMUST00000185504 314 ntBASIC11.05□□□□□ -0.64
Trim39Q9ESN2 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.05□□□□□ -0.64
Trim39Q9ESN2 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim39Q9ESN2 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.05□□□□□ -0.64
Trim39Q9ESN2 Gm5950-201ENSMUST00000213337 772 ntBASIC11.05□□□□□ -0.64
Trim39Q9ESN2 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim39Q9ESN2 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.05□□□□□ -0.64
Trim39Q9ESN2 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim39Q9ESN2 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim39Q9ESN2 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim39Q9ESN2 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim39Q9ESN2 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.05□□□□□ -0.64
Trim39Q9ESN2 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim39Q9ESN2 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim39Q9ESN2 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim39Q9ESN2 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim39Q9ESN2 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trim39Q9ESN2 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim39Q9ESN2 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim39Q9ESN2 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Trim39Q9ESN2 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim39Q9ESN2 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim39Q9ESN2 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim39Q9ESN2 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Trim39Q9ESN2 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim39Q9ESN2 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim39Q9ESN2 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim39Q9ESN2 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.05□□□□□ -0.64
Trim39Q9ESN2 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Gm42535-201ENSMUST00000197312 1399 ntBASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Gm24934-201ENSMUST00000103764 111 ntBASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Gm2991-201ENSMUST00000173338 480 ntBASIC11.04□□□□□ -0.64
Trim39Q9ESN2 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Gm9368-201ENSMUST00000219348 831 ntBASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim39Q9ESN2 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Gm15171-201ENSMUST00000122191 334 ntBASIC11.03□□□□□ -0.64
Trim39Q9ESN2 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim39Q9ESN2 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms