Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gm19309-201ENSMUST00000218295 205 ntBASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Gm38192-201ENSMUST00000194364 1847 ntBASIC12.76□□□□□ -0.37
Ssr1Q9CY50 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssr1Q9CY50 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Gm17420-201ENSMUST00000164753 153 ntBASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Gm21039-201ENSMUST00000223359 2012 ntBASIC12.75□□□□□ -0.37
Ssr1Q9CY50 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr1Q9CY50 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.74□□□□□ -0.37
Ssr1Q9CY50 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Gm9136-201ENSMUST00000193368 454 ntBASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Olfr284-202ENSMUST00000206647 966 ntBASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.74□□□□□ -0.37
Ssr1Q9CY50 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Gm7046-201ENSMUST00000221351 977 ntBASIC12.74□□□□□ -0.37
Ssr1Q9CY50 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Gm43999-201ENSMUST00000204286 2889 ntBASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr1Q9CY50 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 199.7 ms