Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Khdc3Q9CWU5 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Khdc3Q9CWU5 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Khdc3Q9CWU5 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Khdc3Q9CWU5 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Khdc3Q9CWU5 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Khdc3Q9CWU5 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Khdc3Q9CWU5 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Khdc3Q9CWU5 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Khdc3Q9CWU5 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Gm11660-201ENSMUST00000120955 412 ntBASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Gm9192-201ENSMUST00000183221 985 ntBASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Gm5705-201ENSMUST00000066241 711 ntBASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Khdc3Q9CWU5 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Gm11700-201ENSMUST00000119409 403 ntBASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Gm24749-201ENSMUST00000157838 343 ntBASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms