Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Gm7722-201ENSMUST00000120646 741 ntBASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Gm43002-201ENSMUST00000200310 155 ntBASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Gm45598-202ENSMUST00000210719 986 ntBASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Rnf111Q99ML9 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Gm22323-201ENSMUST00000103832 109 ntBASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Gm14247-201ENSMUST00000120950 237 ntBASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Gm15276-201ENSMUST00000145953 498 ntBASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Gm17376-201ENSMUST00000166016 84 ntBASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Gm5706-201ENSMUST00000181525 993 ntBASIC11.34□□□□□ -0.59
Rnf111Q99ML9 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Gm43275-201ENSMUST00000202053 1020 ntBASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Gm44651-201ENSMUST00000207343 372 ntBASIC11.34□□□□□ -0.59
Rnf111Q99ML9 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Gm10254-201ENSMUST00000052888 867 ntBASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms