Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Gm42941-201ENSMUST00000200347 1321 ntBASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Nkx6-1Q99MA9 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Nkx6-1Q99MA9 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkx6-1Q99MA9 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkx6-1Q99MA9 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkx6-1Q99MA9 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.02□□□□□ -0.64
Nkx6-1Q99MA9 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.02□□□□□ -0.64
Nkx6-1Q99MA9 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkx6-1Q99MA9 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Nkx6-1Q99MA9 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Nkx6-1Q99MA9 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkx6-1Q99MA9 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Gm11619-201ENSMUST00000117474 237 ntBASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Gm11244-201ENSMUST00000121243 237 ntBASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Gm7940-201ENSMUST00000218195 769 ntBASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.02□□□□□ -0.65
Nkx6-1Q99MA9 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms