Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm16166-201ENSMUST00000118291 787 ntBASIC10.3□□□□□ -0.76
Scrt1Q99M85 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Rprl1-201ENSMUST00000158050 327 ntBASIC10.3□□□□□ -0.76
Scrt1Q99M85 Gm23119-201ENSMUST00000158610 140 ntBASIC10.3□□□□□ -0.76
Scrt1Q99M85 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.3□□□□□ -0.76
Scrt1Q99M85 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Scrt1Q99M85 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Scrt1Q99M85 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Scrt1Q99M85 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.3□□□□□ -0.76
Scrt1Q99M85 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.3□□□□□ -0.76
Scrt1Q99M85 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Scrt1Q99M85 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Scrt1Q99M85 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.3□□□□□ -0.76
Scrt1Q99M85 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Scrt1Q99M85 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Scrt1Q99M85 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.29□□□□□ -0.76
Scrt1Q99M85 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.29□□□□□ -0.76
Scrt1Q99M85 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Gm26286-201ENSMUST00000104166 134 ntBASIC10.29□□□□□ -0.76
Scrt1Q99M85 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Gm15352-201ENSMUST00000118696 270 ntBASIC10.29□□□□□ -0.76
Scrt1Q99M85 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Gm11980-201ENSMUST00000121445 986 ntBASIC10.29□□□□□ -0.76
Scrt1Q99M85 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC10.29□□□□□ -0.76
Scrt1Q99M85 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Gm18159-201ENSMUST00000174516 1070 ntBASIC10.29□□□□□ -0.76
Scrt1Q99M85 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.29□□□□□ -0.76
Scrt1Q99M85 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.29□□□□□ -0.76
Scrt1Q99M85 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.29□□□□□ -0.76
Scrt1Q99M85 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Scrt1Q99M85 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Scrt1Q99M85 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.28□□□□□ -0.76
Scrt1Q99M85 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Gm20392-201ENSMUST00000173047 701 ntBASIC10.28□□□□□ -0.76
Scrt1Q99M85 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Gm4654-201ENSMUST00000183305 982 ntBASIC10.28□□□□□ -0.76
Scrt1Q99M85 Gm17877-201ENSMUST00000192578 814 ntBASIC10.28□□□□□ -0.76
Scrt1Q99M85 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Scrt1Q99M85 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms