Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp1b1Q99LU0 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.63
Chmp1b1Q99LU0 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Gm13665-201ENSMUST00000120830 528 ntBASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Gm44967-201ENSMUST00000207047 631 ntBASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp1b1Q99LU0 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Gm14247-201ENSMUST00000120950 237 ntBASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Gm26361-201ENSMUST00000158868 186 ntBASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Gm38241-201ENSMUST00000192641 898 ntBASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Gm38317-201ENSMUST00000195564 343 ntBASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms