Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Gm13342-201ENSMUST00000121055 207 ntBASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Gm23119-201ENSMUST00000158610 140 ntBASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Gm37008-201ENSMUST00000195712 319 ntBASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh18Q8VHR0 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh18Q8VHR0 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms