Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Gm9899-201ENSMUST00000065519 555 ntBASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vps39Q8R5L3 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.7□□□□□ -0.54
Vps39Q8R5L3 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Vps39Q8R5L3 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.69□□□□□ -0.54
Vps39Q8R5L3 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 AA914427-201ENSMUST00000193194 1166 ntBASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Gm38317-201ENSMUST00000195564 343 ntBASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Gm43822-201ENSMUST00000200285 476 ntBASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Gm4157-201ENSMUST00000211647 679 ntBASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.69□□□□□ -0.54
Vps39Q8R5L3 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Vps39Q8R5L3 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Gm11439-201ENSMUST00000118598 409 ntBASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Gm8343-201ENSMUST00000182705 994 ntBASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Gm27627-201ENSMUST00000183644 150 ntBASIC11.68□□□□□ -0.54
Vps39Q8R5L3 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Gm43184-201ENSMUST00000197247 542 ntBASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Gm17827-201ENSMUST00000211825 742 ntBASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms