Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Erich3-203ENSMUST00000189969 3460 ntBASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Gm15824-201ENSMUST00000119516 955 ntBASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Snora78-201ENSMUST00000158630 128 ntBASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Gm38002-201ENSMUST00000193255 180 ntBASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Gm8712-201ENSMUST00000221090 701 ntBASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc28aQ8CEI3 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Gm23931-201ENSMUST00000103842 109 ntBASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Gm37489-201ENSMUST00000191883 159 ntBASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Gm4607-201ENSMUST00000206649 577 ntBASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28aQ8CEI3 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.27□□□□□ -0.44
Ccdc28aQ8CEI3 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc28aQ8CEI3 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Ccdc28aQ8CEI3 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc28aQ8CEI3 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc28aQ8CEI3 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc28aQ8CEI3 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc28aQ8CEI3 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Ccdc28aQ8CEI3 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 Gm15547-201ENSMUST00000122152 333 ntBASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 Gm13786-201ENSMUST00000122371 333 ntBASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 Gm19187-201ENSMUST00000206781 892 ntBASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 Gm18065-201ENSMUST00000221395 526 ntBASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28aQ8CEI3 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms