Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm10051-201ENSMUST00000145209 414 ntBASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Gm5706-201ENSMUST00000181525 993 ntBASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Vps53Q8CCB4 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Vps53Q8CCB4 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps53Q8CCB4 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.63□□□□□ -0.23
Vps53Q8CCB4 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.63□□□□□ -0.23
Vps53Q8CCB4 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Gm44999-201ENSMUST00000207456 1493 ntBASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Gm23251-201ENSMUST00000103773 110 ntBASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Gm11989-201ENSMUST00000117240 672 ntBASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Gm11362-201ENSMUST00000118838 850 ntBASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Gm12501-201ENSMUST00000119163 529 ntBASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Gm11667-201ENSMUST00000119828 486 ntBASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Gm17827-201ENSMUST00000211825 742 ntBASIC13.63□□□□□ -0.23
Vps53Q8CCB4 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Gm270-201ENSMUST00000223010 976 ntBASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Gm1821-202ENSMUST00000227415 750 ntBASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps53Q8CCB4 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.63□□□□□ -0.23
Vps53Q8CCB4 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Gm25881-201ENSMUST00000157783 103 ntBASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Gm45219-201ENSMUST00000205602 465 ntBASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Vps53Q8CCB4 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms