Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Rprl1-201ENSMUST00000158050 327 ntBASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trerf1Q8BXJ2 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Gm14130-201ENSMUST00000118417 987 ntBASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Gm14017-201ENSMUST00000121934 386 ntBASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Gm26361-201ENSMUST00000158868 186 ntBASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Gm25700-201ENSMUST00000177693 110 ntBASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Gm44651-201ENSMUST00000207343 372 ntBASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trerf1Q8BXJ2 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms