Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Gm17825-201ENSMUST00000206836 794 ntBASIC11.81□□□□□ -0.52
Ubr7Q8BU04 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ubr7Q8BU04 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.81□□□□□ -0.52
Ubr7Q8BU04 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubr7Q8BU04 CT025551.1-201ENSMUST00000223996 692 ntBASIC11.81□□□□□ -0.52
Ubr7Q8BU04 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubr7Q8BU04 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubr7Q8BU04 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ubr7Q8BU04 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ubr7Q8BU04 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubr7Q8BU04 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.81□□□□□ -0.52
Ubr7Q8BU04 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubr7Q8BU04 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubr7Q8BU04 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubr7Q8BU04 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubr7Q8BU04 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ubr7Q8BU04 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubr7Q8BU04 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubr7Q8BU04 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ubr7Q8BU04 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubr7Q8BU04 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubr7Q8BU04 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.81□□□□□ -0.52
Ubr7Q8BU04 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubr7Q8BU04 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubr7Q8BU04 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubr7Q8BU04 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ubr7Q8BU04 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.81□□□□□ -0.52
Ubr7Q8BU04 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubr7Q8BU04 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Gm23272-201ENSMUST00000104053 129 ntBASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Gm25076-201ENSMUST00000104098 132 ntBASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Gm15374-201ENSMUST00000119313 844 ntBASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Gm11246-201ENSMUST00000120880 345 ntBASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Mir6958-201ENSMUST00000184207 73 ntBASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.8□□□□□ -0.52
Ubr7Q8BU04 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Gm44551-201ENSMUST00000208804 171 ntBASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Gm45550-201ENSMUST00000209380 946 ntBASIC11.8□□□□□ -0.52
Ubr7Q8BU04 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.8□□□□□ -0.52
Ubr7Q8BU04 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Gm5451-201ENSMUST00000080545 579 ntBASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubr7Q8BU04 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr7Q8BU04 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr7Q8BU04 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Ubr7Q8BU04 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.79□□□□□ -0.52
Ubr7Q8BU04 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ubr7Q8BU04 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr7Q8BU04 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr7Q8BU04 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr7Q8BU04 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.79□□□□□ -0.52
Ubr7Q8BU04 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr7Q8BU04 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr7Q8BU04 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ubr7Q8BU04 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ubr7Q8BU04 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr7Q8BU04 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr7Q8BU04 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.79□□□□□ -0.52
Ubr7Q8BU04 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.79□□□□□ -0.52
Ubr7Q8BU04 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr7Q8BU04 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr7Q8BU04 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr7Q8BU04 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC11.79□□□□□ -0.52
Ubr7Q8BU04 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.79□□□□□ -0.52
Ubr7Q8BU04 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Ubr7Q8BU04 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.79□□□□□ -0.52
Ubr7Q8BU04 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms