Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Gm7504-201ENSMUST00000201449 424 ntBASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Gm19091-201ENSMUST00000208120 978 ntBASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Gm9139-201ENSMUST00000218817 700 ntBASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Gm23105-201ENSMUST00000083719 134 ntBASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Gm25517-201ENSMUST00000083865 134 ntBASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Gm23272-201ENSMUST00000104053 129 ntBASIC12.38□□□□□ -0.43
Rd3Q8BRE0 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Gm15615-201ENSMUST00000118876 198 ntBASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Gm14441-201ENSMUST00000121960 540 ntBASIC12.38□□□□□ -0.43
Rd3Q8BRE0 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Gm44124-201ENSMUST00000204159 472 ntBASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rd3Q8BRE0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.37□□□□□ -0.43
Rd3Q8BRE0 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms