Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Col6a5-201ENSMUST00000165165 8046 ntTSL 5 BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Cacna1c-208ENSMUST00000187317 6663 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco3Q8BQM7 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Cracr2a-203ENSMUST00000212051 7625 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Gm12201-201ENSMUST00000120657 1234 ntBASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Gm4271-201ENSMUST00000174444 973 ntBASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Gm18018-201ENSMUST00000198273 408 ntBASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Nlgn3-206ENSMUST00000151528 8541 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Gm8320-201ENSMUST00000177584 1762 ntBASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Gm8303-201ENSMUST00000178371 1762 ntBASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Gm8331-201ENSMUST00000178433 1762 ntBASIC9.6□□□□□ -0.87
Smco3Q8BQM7 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Smco3Q8BQM7 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Gm11918-201ENSMUST00000121660 179 ntBASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC9.59□□□□□ -0.87
Smco3Q8BQM7 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms