Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc40Q8BI79 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc40Q8BI79 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc40Q8BI79 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC12.27□□□□□ -0.44
Ccdc40Q8BI79 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Ccdc40Q8BI79 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc40Q8BI79 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc40Q8BI79 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.27□□□□□ -0.44
Ccdc40Q8BI79 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Ccdc40Q8BI79 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc40Q8BI79 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Ccdc40Q8BI79 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Ccdc40Q8BI79 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc40Q8BI79 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc40Q8BI79 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Gm7722-201ENSMUST00000120646 741 ntBASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Gm12164-201ENSMUST00000121695 551 ntBASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Gm43822-201ENSMUST00000200285 476 ntBASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc40Q8BI79 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 AC121870.2-201ENSMUST00000214343 1870 ntBASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Gm5419-201ENSMUST00000119301 527 ntBASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Gm20482-202ENSMUST00000174729 825 ntBASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Rprl1-202ENSMUST00000198476 238 ntBASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Gm43758-201ENSMUST00000199500 367 ntBASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Gm18165-201ENSMUST00000217426 928 ntBASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Gzmn-202ENSMUST00000225535 989 ntBASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.26□□□□□ -0.45
Ccdc40Q8BI79 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc40Q8BI79 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms