Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.37□□□□□ -0.43
Prpf38bQ80SY5 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Gm12036-201ENSMUST00000120008 530 ntBASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Mir1956-201ENSMUST00000157748 65 ntBASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Gm8451-201ENSMUST00000170338 447 ntBASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Gm7536-201ENSMUST00000077389 444 ntBASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Gm5453-201ENSMUST00000080866 447 ntBASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf38bQ80SY5 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Gm14274-201ENSMUST00000117182 615 ntBASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Gm4726-201ENSMUST00000135604 736 ntBASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Gm6019-201ENSMUST00000148369 736 ntBASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Gm43184-201ENSMUST00000197247 542 ntBASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Gm44980-201ENSMUST00000205826 314 ntBASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Gm18463-201ENSMUST00000207258 474 ntBASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Mt1-202ENSMUST00000211807 1085 ntBASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 AC154757.2-201ENSMUST00000228885 743 ntBASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf38bQ80SY5 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms