Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gm7722-201ENSMUST00000120646 741 ntBASIC11.15□□□□□ -0.62
Nr1h4Q60641 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.15□□□□□ -0.62
Nr1h4Q60641 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Gm42627-201ENSMUST00000197347 224 ntBASIC11.15□□□□□ -0.62
Nr1h4Q60641 Gm5950-201ENSMUST00000213337 772 ntBASIC11.15□□□□□ -0.62
Nr1h4Q60641 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nr1h4Q60641 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nr1h4Q60641 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nr1h4Q60641 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nr1h4Q60641 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Nr1h4Q60641 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Nr1h4Q60641 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nr1h4Q60641 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nr1h4Q60641 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Nr1h4Q60641 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.14□□□□□ -0.63
Nr1h4Q60641 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.14□□□□□ -0.63
Nr1h4Q60641 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Gm13226-201ENSMUST00000117838 404 ntBASIC11.14□□□□□ -0.63
Nr1h4Q60641 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Gm27514-201ENSMUST00000183692 110 ntBASIC11.14□□□□□ -0.63
Nr1h4Q60641 Gm38314-201ENSMUST00000195709 625 ntBASIC11.14□□□□□ -0.63
Nr1h4Q60641 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Gm807-202ENSMUST00000224929 408 ntBASIC11.14□□□□□ -0.63
Nr1h4Q60641 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Nr1h4Q60641 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nr1h4Q60641 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Nr1h4Q60641 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nr1h4Q60641 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nr1h4Q60641 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nr1h4Q60641 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nr1h4Q60641 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.13□□□□□ -0.63
Nr1h4Q60641 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Nr1h4Q60641 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nr1h4Q60641 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nr1h4Q60641 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Nr1h4Q60641 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.13□□□□□ -0.63
Nr1h4Q60641 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Nr1h4Q60641 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nr1h4Q60641 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nr1h4Q60641 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nr1h4Q60641 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.13□□□□□ -0.63
Nr1h4Q60641 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nr1h4Q60641 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.13□□□□□ -0.63
Nr1h4Q60641 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms