Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 AC167022.1-201ENSMUST00000218647 1458 ntBASIC8.77□□□□□ -1.01
Trav3-3Q5R1C3 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Gm45191-201ENSMUST00000205846 5439 ntBASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 AC138329.2-201ENSMUST00000225579 1842 ntBASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Gm12539-201ENSMUST00000121549 1098 ntBASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Gm13394-201ENSMUST00000121658 1000 ntBASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Gm14760-201ENSMUST00000121831 999 ntBASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Gm8099-201ENSMUST00000200510 742 ntBASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Gm10371-202ENSMUST00000228010 1081 ntBASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Gm11735-201ENSMUST00000106377 1581 ntBASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Eno2-201ENSMUST00000004378 2795 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Trav3-3Q5R1C3 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Gm42427-201ENSMUST00000200473 5292 ntBASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Nln-205ENSMUST00000224945 2486 ntBASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Susd2-202ENSMUST00000095541 3151 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Gm11637-201ENSMUST00000120601 592 ntBASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Gm28693-202ENSMUST00000190758 331 ntBASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Gm44064-201ENSMUST00000204964 1087 ntBASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms