Protein–RNA interactions for Protein: Q3SXD3

Hddc2, HD domain-containing protein 2, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hddc2Q3SXD3 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Hddc2Q3SXD3 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hddc2Q3SXD3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hddc2Q3SXD3 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC10.83□□□□□ -0.68
Hddc2Q3SXD3 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Gm44882-201ENSMUST00000205702 802 ntBASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 AC121870.2-201ENSMUST00000214343 1870 ntBASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Hddc2Q3SXD3 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Gm2495-201ENSMUST00000191160 466 ntBASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Gm37922-201ENSMUST00000195596 455 ntBASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Gm38671-201ENSMUST00000200573 130 ntBASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Phtf1os-201ENSMUST00000160110 4046 ntBASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Hddc2Q3SXD3 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hddc2Q3SXD3 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hddc2Q3SXD3 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hddc2Q3SXD3 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hddc2Q3SXD3 Gm16478-201ENSMUST00000208113 5084 ntBASIC10.8□□□□□ -0.68
Hddc2Q3SXD3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Hddc2Q3SXD3 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Hddc2Q3SXD3 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Hddc2Q3SXD3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms