Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.1□□□□□ -0.63
Nkx3-2P97503 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Gm2553-201ENSMUST00000215986 605 ntBASIC11.1□□□□□ -0.63
Nkx3-2P97503 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.1□□□□□ -0.63
Nkx3-2P97503 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.1□□□□□ -0.63
Nkx3-2P97503 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.1□□□□□ -0.63
Nkx3-2P97503 Ginm1-202ENSMUST00000065124 300 ntBASIC11.1□□□□□ -0.63
Nkx3-2P97503 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx3-2P97503 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.1□□□□□ -0.63
Nkx3-2P97503 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx3-2P97503 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx3-2P97503 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx3-2P97503 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nkx3-2P97503 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.09□□□□□ -0.63
Nkx3-2P97503 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.09□□□□□ -0.63
Nkx3-2P97503 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Gm15432-201ENSMUST00000121106 195 ntBASIC11.09□□□□□ -0.63
Nkx3-2P97503 Gm12176-201ENSMUST00000121420 875 ntBASIC11.09□□□□□ -0.63
Nkx3-2P97503 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Gm8815-201ENSMUST00000173809 620 ntBASIC11.09□□□□□ -0.63
Nkx3-2P97503 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Nkx3-2P97503 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Gm10774-201ENSMUST00000188689 204 ntBASIC11.09□□□□□ -0.63
Nkx3-2P97503 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.09□□□□□ -0.63
Nkx3-2P97503 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.09□□□□□ -0.63
Nkx3-2P97503 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx3-2P97503 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx3-2P97503 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx3-2P97503 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Nkx3-2P97503 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.09□□□□□ -0.63
Nkx3-2P97503 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx3-2P97503 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Nkx3-2P97503 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Nkx3-2P97503 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Gm13461-201ENSMUST00000120980 662 ntBASIC11.08□□□□□ -0.64
Nkx3-2P97503 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.08□□□□□ -0.64
Nkx3-2P97503 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx3-2P97503 Gm19287-201ENSMUST00000203190 358 ntBASIC11.08□□□□□ -0.64
Nkx3-2P97503 Gm45118-201ENSMUST00000208928 825 ntBASIC11.08□□□□□ -0.64
Nkx3-2P97503 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.08□□□□□ -0.64
Nkx3-2P97503 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms