Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcgP82348 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcgP82348 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcgP82348 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcgP82348 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
SgcgP82348 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
SgcgP82348 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcgP82348 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.55□□□□□ -0.56
SgcgP82348 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
SgcgP82348 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
SgcgP82348 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.55□□□□□ -0.56
SgcgP82348 Gm16166-201ENSMUST00000118291 787 ntBASIC11.55□□□□□ -0.56
SgcgP82348 Gm14585-201ENSMUST00000120713 634 ntBASIC11.55□□□□□ -0.56
SgcgP82348 Gm14460-201ENSMUST00000121511 639 ntBASIC11.55□□□□□ -0.56
SgcgP82348 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.55□□□□□ -0.56
SgcgP82348 Gm14665-201ENSMUST00000122294 557 ntBASIC11.55□□□□□ -0.56
SgcgP82348 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.55□□□□□ -0.56
SgcgP82348 Gm12407-201ENSMUST00000180219 324 ntBASIC11.55□□□□□ -0.56
SgcgP82348 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.55□□□□□ -0.56
SgcgP82348 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.55□□□□□ -0.56
SgcgP82348 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC11.55□□□□□ -0.56
SgcgP82348 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.55□□□□□ -0.56
SgcgP82348 Gm44551-201ENSMUST00000208804 171 ntBASIC11.55□□□□□ -0.56
SgcgP82348 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.55□□□□□ -0.56
SgcgP82348 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.55□□□□□ -0.56
SgcgP82348 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.55□□□□□ -0.56
SgcgP82348 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.55□□□□□ -0.56
SgcgP82348 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.55□□□□□ -0.56
SgcgP82348 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
SgcgP82348 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.55□□□□□ -0.56
SgcgP82348 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.55□□□□□ -0.56
SgcgP82348 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
SgcgP82348 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
SgcgP82348 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
SgcgP82348 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.55□□□□□ -0.56
SgcgP82348 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.55□□□□□ -0.56
SgcgP82348 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcgP82348 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcgP82348 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcgP82348 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcgP82348 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
SgcgP82348 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SgcgP82348 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
SgcgP82348 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcgP82348 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcgP82348 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcgP82348 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcgP82348 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.54□□□□□ -0.56
SgcgP82348 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcgP82348 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SgcgP82348 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.54□□□□□ -0.56
SgcgP82348 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
SgcgP82348 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SgcgP82348 Gm11246-201ENSMUST00000120880 345 ntBASIC11.54□□□□□ -0.56
SgcgP82348 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.54□□□□□ -0.56
SgcgP82348 Gm6114-201ENSMUST00000182472 968 ntBASIC11.54□□□□□ -0.56
SgcgP82348 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.54□□□□□ -0.56
SgcgP82348 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.54□□□□□ -0.56
SgcgP82348 Gm2517-201ENSMUST00000215651 348 ntBASIC11.54□□□□□ -0.56
SgcgP82348 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.54□□□□□ -0.56
SgcgP82348 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcgP82348 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcgP82348 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcgP82348 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcgP82348 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcgP82348 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.54□□□□□ -0.56
SgcgP82348 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.54□□□□□ -0.56
SgcgP82348 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcgP82348 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcgP82348 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms