Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm6794-201ENSMUST00000203829 457 ntBASIC18.81■□□□□ 0.6
Cux2P70298 Gm18256-201ENSMUST00000209087 907 ntBASIC18.81■□□□□ 0.6
Cux2P70298 Gm45258-201ENSMUST00000210042 853 ntBASIC18.81■□□□□ 0.6
Cux2P70298 CT030035.1-201ENSMUST00000223964 935 ntBASIC18.81■□□□□ 0.6
Cux2P70298 AC159002.1-201ENSMUST00000226714 924 ntBASIC18.81■□□□□ 0.6
Cux2P70298 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cux2P70298 Gm7841-201ENSMUST00000122108 1629 ntBASIC18.81■□□□□ 0.6
Cux2P70298 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cux2P70298 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC18.81■□□□□ 0.6
Cux2P70298 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cux2P70298 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cux2P70298 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cux2P70298 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cux2P70298 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cux2P70298 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cux2P70298 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
Cux2P70298 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cux2P70298 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cux2P70298 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cux2P70298 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cux2P70298 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Cux2P70298 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cux2P70298 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cux2P70298 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cux2P70298 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cux2P70298 Gm4705-201ENSMUST00000177415 354 ntBASIC18.8■□□□□ 0.6
Cux2P70298 Gm18552-201ENSMUST00000187425 538 ntBASIC18.8■□□□□ 0.6
Cux2P70298 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cux2P70298 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC18.8■□□□□ 0.6
Cux2P70298 AC125409.3-201ENSMUST00000223488 653 ntBASIC18.8■□□□□ 0.6
Cux2P70298 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cux2P70298 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cux2P70298 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cux2P70298 Gm13608-201ENSMUST00000121807 1406 ntBASIC18.8■□□□□ 0.6
Cux2P70298 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cux2P70298 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cux2P70298 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cux2P70298 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cux2P70298 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cux2P70298 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cux2P70298 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cux2P70298 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cux2P70298 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cux2P70298 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cux2P70298 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cux2P70298 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cux2P70298 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Cux2P70298 Gm15617-201ENSMUST00000118973 771 ntBASIC18.79■□□□□ 0.6
Cux2P70298 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cux2P70298 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cux2P70298 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cux2P70298 Snord55-201ENSMUST00000174939 79 ntBASIC18.79■□□□□ 0.6
Cux2P70298 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cux2P70298 Gm7833-201ENSMUST00000183288 990 ntBASIC18.79■□□□□ 0.6
Cux2P70298 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cux2P70298 Gm37858-201ENSMUST00000192759 1231 ntBASIC18.79■□□□□ 0.6
Cux2P70298 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC18.79■□□□□ 0.6
Cux2P70298 Gm7880-201ENSMUST00000203748 871 ntBASIC18.79■□□□□ 0.6
Cux2P70298 Gm44124-201ENSMUST00000204159 472 ntBASIC18.79■□□□□ 0.6
Cux2P70298 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC18.79■□□□□ 0.6
Cux2P70298 AC116797.2-202ENSMUST00000223587 1017 ntBASIC18.79■□□□□ 0.6
Cux2P70298 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cux2P70298 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cux2P70298 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cux2P70298 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cux2P70298 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cux2P70298 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cux2P70298 Matn2-206ENSMUST00000228570 2798 ntBASIC18.79■□□□□ 0.6
Cux2P70298 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cux2P70298 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cux2P70298 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
Cux2P70298 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.79■□□□□ 0.6
Cux2P70298 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cux2P70298 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cux2P70298 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC18.78■□□□□ 0.6
Cux2P70298 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cux2P70298 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC18.78■□□□□ 0.6
Cux2P70298 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cux2P70298 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Cux2P70298 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cux2P70298 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cux2P70298 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cux2P70298 Ighv13-1-201ENSMUST00000103480 294 ntBASIC18.78■□□□□ 0.6
Cux2P70298 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cux2P70298 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cux2P70298 Gm15626-201ENSMUST00000117478 868 ntBASIC18.78■□□□□ 0.6
Cux2P70298 Gm13426-201ENSMUST00000117887 795 ntBASIC18.78■□□□□ 0.6
Cux2P70298 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC18.78■□□□□ 0.6
Cux2P70298 Gm17782-201ENSMUST00000174345 880 ntBASIC18.78■□□□□ 0.6
Cux2P70298 Gm42732-201ENSMUST00000202887 1197 ntBASIC18.78■□□□□ 0.6
Cux2P70298 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC18.78■□□□□ 0.6
Cux2P70298 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cux2P70298 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cux2P70298 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cux2P70298 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cux2P70298 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cux2P70298 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cux2P70298 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cux2P70298 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cux2P70298 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms