Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgb1P63158 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgb1P63158 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Hmgb1P63158 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgb1P63158 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgb1P63158 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgb1P63158 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgb1P63158 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgb1P63158 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgb1P63158 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.9□□□□□ -0.34
Hmgb1P63158 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Hmgb1P63158 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgb1P63158 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgb1P63158 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Hmgb1P63158 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgb1P63158 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.9□□□□□ -0.34
Hmgb1P63158 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Hmgb1P63158 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgb1P63158 Gm2594-201ENSMUST00000214774 742 ntBASIC12.9□□□□□ -0.34
Hmgb1P63158 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.9□□□□□ -0.34
Hmgb1P63158 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.9□□□□□ -0.34
Hmgb1P63158 Cts7-204ENSMUST00000225321 1257 ntBASIC12.9□□□□□ -0.34
Hmgb1P63158 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgb1P63158 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Hmgb1P63158 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Hmgb1P63158 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgb1P63158 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.9□□□□□ -0.34
Hmgb1P63158 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.9□□□□□ -0.34
Hmgb1P63158 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.9□□□□□ -0.34
Hmgb1P63158 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgb1P63158 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgb1P63158 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.9□□□□□ -0.34
Hmgb1P63158 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgb1P63158 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgb1P63158 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Hmgb1P63158 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgb1P63158 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgb1P63158 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgb1P63158 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.35
Hmgb1P63158 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Hmgb1P63158 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.9□□□□□ -0.35
Hmgb1P63158 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Hmgb1P63158 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgb1P63158 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgb1P63158 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Hmgb1P63158 Gm45354-201ENSMUST00000199820 2557 ntBASIC12.89□□□□□ -0.35
Hmgb1P63158 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgb1P63158 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgb1P63158 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgb1P63158 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgb1P63158 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Hmgb1P63158 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgb1P63158 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgb1P63158 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgb1P63158 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgb1P63158 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.89□□□□□ -0.35
Hmgb1P63158 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgb1P63158 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.89□□□□□ -0.35
Hmgb1P63158 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC12.89□□□□□ -0.35
Hmgb1P63158 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgb1P63158 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgb1P63158 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.89□□□□□ -0.35
Hmgb1P63158 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgb1P63158 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgb1P63158 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgb1P63158 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgb1P63158 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgb1P63158 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Hmgb1P63158 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Hmgb1P63158 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.89□□□□□ -0.35
Hmgb1P63158 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgb1P63158 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgb1P63158 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgb1P63158 AC140462.2-201ENSMUST00000225718 2433 ntBASIC12.89□□□□□ -0.35
Hmgb1P63158 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgb1P63158 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgb1P63158 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.89□□□□□ -0.35
Hmgb1P63158 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgb1P63158 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.88□□□□□ -0.35
Hmgb1P63158 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.88□□□□□ -0.35
Hmgb1P63158 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.88□□□□□ -0.35
Hmgb1P63158 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Hmgb1P63158 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgb1P63158 Gm22133-201ENSMUST00000102082 109 ntBASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms