Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Lsm3P62311 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm3P62311 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm3P62311 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm3P62311 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm3P62311 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm3P62311 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.71
Lsm3P62311 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.58□□□□□ -0.72
Lsm3P62311 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.58□□□□□ -0.72
Lsm3P62311 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Lsm3P62311 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC10.58□□□□□ -0.72
Lsm3P62311 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Lsm3P62311 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Lsm3P62311 Gm14441-201ENSMUST00000121960 540 ntBASIC10.58□□□□□ -0.72
Lsm3P62311 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.58□□□□□ -0.72
Lsm3P62311 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Lsm3P62311 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC10.58□□□□□ -0.72
Lsm3P62311 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Gm5781-201ENSMUST00000219792 443 ntBASIC10.58□□□□□ -0.72
Lsm3P62311 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC10.58□□□□□ -0.72
Lsm3P62311 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC10.58□□□□□ -0.72
Lsm3P62311 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Lsm3P62311 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC10.58□□□□□ -0.72
Lsm3P62311 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.58□□□□□ -0.72
Lsm3P62311 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.58□□□□□ -0.72
Lsm3P62311 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm3P62311 Syt7-204ENSMUST00000223586 1344 ntBASIC10.58□□□□□ -0.72
Lsm3P62311 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm3P62311 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Lsm3P62311 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm3P62311 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm3P62311 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm3P62311 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm3P62311 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm3P62311 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm3P62311 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm3P62311 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.57□□□□□ -0.72
Lsm3P62311 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm3P62311 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm3P62311 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm3P62311 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Lsm3P62311 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC10.57□□□□□ -0.72
Lsm3P62311 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm3P62311 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Lsm3P62311 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.57□□□□□ -0.72
Lsm3P62311 Gm26308-201ENSMUST00000157768 69 ntBASIC10.57□□□□□ -0.72
Lsm3P62311 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm3P62311 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm3P62311 Gm2495-201ENSMUST00000191160 466 ntBASIC10.57□□□□□ -0.72
Lsm3P62311 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC10.57□□□□□ -0.72
Lsm3P62311 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm3P62311 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.57□□□□□ -0.72
Lsm3P62311 Gm6218-201ENSMUST00000219812 628 ntBASIC10.57□□□□□ -0.72
Lsm3P62311 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.57□□□□□ -0.72
Lsm3P62311 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.57□□□□□ -0.72
Lsm3P62311 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm3P62311 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm3P62311 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm3P62311 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Lsm3P62311 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Lsm3P62311 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm3P62311 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Lsm3P62311 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm3P62311 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Lsm3P62311 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms