Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Sssca1P56873 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sssca1P56873 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Sssca1P56873 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
Sssca1P56873 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Sssca1P56873 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sssca1P56873 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC9.42□□□□□ -0.9
Sssca1P56873 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Sssca1P56873 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC9.42□□□□□ -0.9
Sssca1P56873 Gm4864-201ENSMUST00000219894 1461 ntBASIC9.42□□□□□ -0.9
Sssca1P56873 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Sssca1P56873 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Sssca1P56873 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Sssca1P56873 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Sssca1P56873 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Sssca1P56873 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sssca1P56873 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC9.42□□□□□ -0.9
Sssca1P56873 Gm8602-201ENSMUST00000184045 607 ntBASIC9.42□□□□□ -0.9
Sssca1P56873 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Sssca1P56873 Gm45784-201ENSMUST00000188360 142 ntBASIC9.42□□□□□ -0.9
Sssca1P56873 Gm38114-201ENSMUST00000191877 1232 ntBASIC9.42□□□□□ -0.9
Sssca1P56873 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC9.42□□□□□ -0.9
Sssca1P56873 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC9.42□□□□□ -0.9
Sssca1P56873 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sssca1P56873 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sssca1P56873 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sssca1P56873 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sssca1P56873 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sssca1P56873 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Sssca1P56873 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sssca1P56873 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Sssca1P56873 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Sssca1P56873 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Sssca1P56873 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sssca1P56873 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Sssca1P56873 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sssca1P56873 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sssca1P56873 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sssca1P56873 Gm43937-201ENSMUST00000204640 3122 ntBASIC9.42□□□□□ -0.9
Sssca1P56873 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Sssca1P56873 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sssca1P56873 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Sssca1P56873 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sssca1P56873 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Sssca1P56873 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sssca1P56873 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sssca1P56873 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Sssca1P56873 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sssca1P56873 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sssca1P56873 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sssca1P56873 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Sssca1P56873 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sssca1P56873 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Sssca1P56873 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sssca1P56873 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sssca1P56873 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sssca1P56873 Gm13135-201ENSMUST00000117628 3121 ntBASIC9.41□□□□□ -0.9
Sssca1P56873 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Sssca1P56873 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sssca1P56873 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC9.41□□□□□ -0.9
Sssca1P56873 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sssca1P56873 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Sssca1P56873 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sssca1P56873 BC043934-202ENSMUST00000185694 2356 ntBASIC9.41□□□□□ -0.9
Sssca1P56873 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Sssca1P56873 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sssca1P56873 Gm14660-201ENSMUST00000119809 575 ntBASIC9.41□□□□□ -0.9
Sssca1P56873 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC9.41□□□□□ -0.9
Sssca1P56873 Gm11960-201ENSMUST00000122068 925 ntBASIC9.41□□□□□ -0.9
Sssca1P56873 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC9.41□□□□□ -0.9
Sssca1P56873 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC9.41□□□□□ -0.9
Sssca1P56873 Mospd4-201ENSMUST00000180618 576 ntBASIC9.41□□□□□ -0.9
Sssca1P56873 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC9.41□□□□□ -0.9
Sssca1P56873 Gm43118-201ENSMUST00000199149 775 ntBASIC9.41□□□□□ -0.9
Sssca1P56873 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sssca1P56873 Wdyhv1-206ENSMUST00000227142 786 ntBASIC9.41□□□□□ -0.9
Sssca1P56873 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sssca1P56873 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC9.41□□□□□ -0.9
Sssca1P56873 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sssca1P56873 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Sssca1P56873 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sssca1P56873 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sssca1P56873 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Sssca1P56873 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Sssca1P56873 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC9.41□□□□□ -0.9
Sssca1P56873 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sssca1P56873 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC9.41□□□□□ -0.9
Sssca1P56873 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sssca1P56873 Gm5847-201ENSMUST00000178959 1595 ntBASIC9.41□□□□□ -0.9
Sssca1P56873 Gm6560-201ENSMUST00000198588 1591 ntBASIC9.41□□□□□ -0.9
Sssca1P56873 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Sssca1P56873 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9.41□□□□□ -0.9
Sssca1P56873 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Sssca1P56873 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Sssca1P56873 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sssca1P56873 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Sssca1P56873 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Sssca1P56873 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sssca1P56873 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC9.4□□□□□ -0.9
Sssca1P56873 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms