Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.24□□□□□ -0.61
Prox1P48437 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.24□□□□□ -0.61
Prox1P48437 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Prox1P48437 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Prox1P48437 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Mir1247-201ENSMUST00000116706 82 ntBASIC11.24□□□□□ -0.61
Prox1P48437 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.24□□□□□ -0.61
Prox1P48437 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.24□□□□□ -0.61
Prox1P48437 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.24□□□□□ -0.61
Prox1P48437 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Prox1P48437 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Prox1P48437 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Prox1P48437 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Prox1P48437 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.24□□□□□ -0.61
Prox1P48437 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.24□□□□□ -0.61
Prox1P48437 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Prox1P48437 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.24□□□□□ -0.61
Prox1P48437 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Prox1P48437 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.24□□□□□ -0.61
Prox1P48437 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Prox1P48437 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.23□□□□□ -0.61
Prox1P48437 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Prox1P48437 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prox1P48437 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Prox1P48437 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prox1P48437 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prox1P48437 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prox1P48437 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prox1P48437 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Prox1P48437 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Prox1P48437 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.23□□□□□ -0.61
Prox1P48437 Gm15198-201ENSMUST00000117283 177 ntBASIC11.23□□□□□ -0.61
Prox1P48437 Gm5187-201ENSMUST00000117317 991 ntBASIC11.23□□□□□ -0.61
Prox1P48437 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.23□□□□□ -0.61
Prox1P48437 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.23□□□□□ -0.61
Prox1P48437 Gm25261-201ENSMUST00000157416 134 ntBASIC11.23□□□□□ -0.61
Prox1P48437 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.23□□□□□ -0.61
Prox1P48437 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prox1P48437 Gm27514-201ENSMUST00000183692 110 ntBASIC11.23□□□□□ -0.61
Prox1P48437 Gm27572-201ENSMUST00000183702 255 ntBASIC11.23□□□□□ -0.61
Prox1P48437 Gm42937-201ENSMUST00000197360 752 ntBASIC11.23□□□□□ -0.61
Prox1P48437 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prox1P48437 Snora73a-201ENSMUST00000082453 205 ntBASIC11.23□□□□□ -0.61
Prox1P48437 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Prox1P48437 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prox1P48437 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prox1P48437 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prox1P48437 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.23□□□□□ -0.61
Prox1P48437 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prox1P48437 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prox1P48437 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prox1P48437 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Prox1P48437 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prox1P48437 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prox1P48437 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Prox1P48437 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prox1P48437 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Prox1P48437 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prox1P48437 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prox1P48437 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prox1P48437 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Prox1P48437 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Prox1P48437 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Prox1P48437 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.22□□□□□ -0.61
Prox1P48437 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Prox1P48437 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.22□□□□□ -0.61
Prox1P48437 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.22□□□□□ -0.61
Prox1P48437 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 179.5 ms