Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.57□□□□□ -0.72
Rfx3P48381 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.57□□□□□ -0.72
Rfx3P48381 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Rfx3P48381 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Rfx3P48381 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.57□□□□□ -0.72
Rfx3P48381 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.57□□□□□ -0.72
Rfx3P48381 Gm45865-201ENSMUST00000211815 945 ntBASIC10.57□□□□□ -0.72
Rfx3P48381 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.57□□□□□ -0.72
Rfx3P48381 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.57□□□□□ -0.72
Rfx3P48381 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Rfx3P48381 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Rfx3P48381 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.57□□□□□ -0.72
Rfx3P48381 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.57□□□□□ -0.72
Rfx3P48381 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.57□□□□□ -0.72
Rfx3P48381 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.57□□□□□ -0.72
Rfx3P48381 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.57□□□□□ -0.72
Rfx3P48381 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.57□□□□□ -0.72
Rfx3P48381 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.57□□□□□ -0.72
Rfx3P48381 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Rfx3P48381 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rfx3P48381 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rfx3P48381 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rfx3P48381 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rfx3P48381 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.56□□□□□ -0.72
Rfx3P48381 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rfx3P48381 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Rfx3P48381 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rfx3P48381 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rfx3P48381 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.56□□□□□ -0.72
Rfx3P48381 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rfx3P48381 Gm6963-201ENSMUST00000147879 379 ntBASIC10.56□□□□□ -0.72
Rfx3P48381 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rfx3P48381 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.56□□□□□ -0.72
Rfx3P48381 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.56□□□□□ -0.72
Rfx3P48381 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Rfx3P48381 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.56□□□□□ -0.72
Rfx3P48381 Gm17931-201ENSMUST00000208132 634 ntBASIC10.56□□□□□ -0.72
Rfx3P48381 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rfx3P48381 Cts7-204ENSMUST00000225321 1257 ntBASIC10.56□□□□□ -0.72
Rfx3P48381 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.56□□□□□ -0.72
Rfx3P48381 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rfx3P48381 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.56□□□□□ -0.72
Rfx3P48381 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Rfx3P48381 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.56□□□□□ -0.72
Rfx3P48381 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rfx3P48381 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Rfx3P48381 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rfx3P48381 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rfx3P48381 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Rfx3P48381 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rfx3P48381 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.56□□□□□ -0.72
Rfx3P48381 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.56□□□□□ -0.72
Rfx3P48381 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rfx3P48381 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rfx3P48381 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rfx3P48381 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Rfx3P48381 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rfx3P48381 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.56□□□□□ -0.72
Rfx3P48381 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rfx3P48381 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rfx3P48381 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rfx3P48381 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rfx3P48381 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Rfx3P48381 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.56□□□□□ -0.72
Rfx3P48381 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rfx3P48381 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rfx3P48381 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rfx3P48381 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rfx3P48381 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Rfx3P48381 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Rfx3P48381 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.55□□□□□ -0.72
Rfx3P48381 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rfx3P48381 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rfx3P48381 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rfx3P48381 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rfx3P48381 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.55□□□□□ -0.72
Rfx3P48381 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms