Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fen1P39749 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.76□□□□□ -0.53
Fen1P39749 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fen1P39749 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fen1P39749 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fen1P39749 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fen1P39749 Gm12058-201ENSMUST00000118614 437 ntBASIC11.76□□□□□ -0.53
Fen1P39749 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fen1P39749 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.76□□□□□ -0.53
Fen1P39749 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fen1P39749 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.76□□□□□ -0.53
Fen1P39749 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fen1P39749 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.76□□□□□ -0.53
Fen1P39749 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fen1P39749 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fen1P39749 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fen1P39749 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fen1P39749 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fen1P39749 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Fen1P39749 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.76□□□□□ -0.53
Fen1P39749 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fen1P39749 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Fen1P39749 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.76□□□□□ -0.53
Fen1P39749 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fen1P39749 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.76□□□□□ -0.53
Fen1P39749 BC043934-202ENSMUST00000185694 2356 ntBASIC11.76□□□□□ -0.53
Fen1P39749 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fen1P39749 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fen1P39749 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fen1P39749 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.76□□□□□ -0.53
Fen1P39749 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Fen1P39749 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.75□□□□□ -0.53
Fen1P39749 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Fen1P39749 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.75□□□□□ -0.53
Fen1P39749 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.75□□□□□ -0.53
Fen1P39749 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 Gm37008-201ENSMUST00000195712 319 ntBASIC11.75□□□□□ -0.53
Fen1P39749 Gm18711-201ENSMUST00000199341 750 ntBASIC11.75□□□□□ -0.53
Fen1P39749 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.75□□□□□ -0.53
Fen1P39749 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Fen1P39749 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.75□□□□□ -0.53
Fen1P39749 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.75□□□□□ -0.53
Fen1P39749 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.75□□□□□ -0.53
Fen1P39749 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Fen1P39749 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.75□□□□□ -0.53
Fen1P39749 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC11.75□□□□□ -0.53
Fen1P39749 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fen1P39749 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC11.75□□□□□ -0.53
Fen1P39749 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.74□□□□□ -0.53
Fen1P39749 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fen1P39749 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fen1P39749 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Fen1P39749 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fen1P39749 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fen1P39749 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Fen1P39749 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fen1P39749 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fen1P39749 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fen1P39749 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fen1P39749 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fen1P39749 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fen1P39749 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fen1P39749 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Fen1P39749 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.74□□□□□ -0.53
Fen1P39749 Gm4986-201ENSMUST00000119731 549 ntBASIC11.74□□□□□ -0.53
Fen1P39749 Gm15610-201ENSMUST00000120584 195 ntBASIC11.74□□□□□ -0.53
Fen1P39749 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.74□□□□□ -0.53
Fen1P39749 Gm25261-201ENSMUST00000157416 134 ntBASIC11.74□□□□□ -0.53
Fen1P39749 Gm16379-201ENSMUST00000161469 348 ntBASIC11.74□□□□□ -0.53
Fen1P39749 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fen1P39749 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Fen1P39749 Gm28882-201ENSMUST00000185504 314 ntBASIC11.74□□□□□ -0.53
Fen1P39749 Gm8762-201ENSMUST00000193486 339 ntBASIC11.74□□□□□ -0.53
Fen1P39749 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms