Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC9.23□□□□□ -0.93
Rom1P32958 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC9.23□□□□□ -0.93
Rom1P32958 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Rom1P32958 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Rom1P32958 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC9.23□□□□□ -0.93
Rom1P32958 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC9.23□□□□□ -0.93
Rom1P32958 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC9.23□□□□□ -0.93
Rom1P32958 Gm18065-201ENSMUST00000221395 526 ntBASIC9.23□□□□□ -0.93
Rom1P32958 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC9.23□□□□□ -0.93
Rom1P32958 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
Rom1P32958 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Rom1P32958 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
Rom1P32958 Gm21939-201ENSMUST00000221137 2773 ntBASIC9.23□□□□□ -0.93
Rom1P32958 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Rom1P32958 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Rom1P32958 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Gm12463-201ENSMUST00000118271 849 ntBASIC9.22□□□□□ -0.93
Rom1P32958 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Rom1P32958 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC9.22□□□□□ -0.93
Rom1P32958 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC9.22□□□□□ -0.93
Rom1P32958 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Uba52-ps-201ENSMUST00000183770 379 ntBASIC9.22□□□□□ -0.93
Rom1P32958 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC9.22□□□□□ -0.93
Rom1P32958 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC9.22□□□□□ -0.93
Rom1P32958 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC9.22□□□□□ -0.93
Rom1P32958 Tyms-ps-201ENSMUST00000219550 915 ntBASIC9.22□□□□□ -0.93
Rom1P32958 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC9.22□□□□□ -0.93
Rom1P32958 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Rom1P32958 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Rom1P32958 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Rom1P32958 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC9.22□□□□□ -0.93
Rom1P32958 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Rom1P32958 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC9.22□□□□□ -0.93
Rom1P32958 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Rom1P32958 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Rom1P32958 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Rom1P32958 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rom1P32958 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Rom1P32958 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Rom1P32958 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Rom1P32958 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Rom1P32958 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
Rom1P32958 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms