Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd40lgP27548 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cd40lgP27548 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd40lgP27548 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cd40lgP27548 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cd40lgP27548 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.85□□□□□ -0.67
Cd40lgP27548 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd40lgP27548 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.85□□□□□ -0.67
Cd40lgP27548 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd40lgP27548 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.85□□□□□ -0.67
Cd40lgP27548 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.85□□□□□ -0.67
Cd40lgP27548 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd40lgP27548 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd40lgP27548 Gm11511-201ENSMUST00000118146 540 ntBASIC10.85□□□□□ -0.67
Cd40lgP27548 Gm7722-201ENSMUST00000120646 741 ntBASIC10.85□□□□□ -0.67
Cd40lgP27548 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.85□□□□□ -0.67
Cd40lgP27548 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.85□□□□□ -0.67
Cd40lgP27548 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.85□□□□□ -0.67
Cd40lgP27548 Gm28450-201ENSMUST00000187349 638 ntBASIC10.85□□□□□ -0.67
Cd40lgP27548 Rps4l-202ENSMUST00000204242 789 ntBASIC10.85□□□□□ -0.67
Cd40lgP27548 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.85□□□□□ -0.67
Cd40lgP27548 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.85□□□□□ -0.67
Cd40lgP27548 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.85□□□□□ -0.67
Cd40lgP27548 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd40lgP27548 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd40lgP27548 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cd40lgP27548 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cd40lgP27548 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Cd40lgP27548 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.85□□□□□ -0.67
Cd40lgP27548 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd40lgP27548 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd40lgP27548 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.85□□□□□ -0.67
Cd40lgP27548 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cd40lgP27548 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cd40lgP27548 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.85□□□□□ -0.67
Cd40lgP27548 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd40lgP27548 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd40lgP27548 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd40lgP27548 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.85□□□□□ -0.67
Cd40lgP27548 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd40lgP27548 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd40lgP27548 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd40lgP27548 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd40lgP27548 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd40lgP27548 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd40lgP27548 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.85□□□□□ -0.67
Cd40lgP27548 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cd40lgP27548 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cd40lgP27548 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd40lgP27548 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd40lgP27548 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd40lgP27548 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.84□□□□□ -0.67
Cd40lgP27548 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cd40lgP27548 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Cd40lgP27548 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd40lgP27548 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd40lgP27548 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.84□□□□□ -0.67
Cd40lgP27548 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cd40lgP27548 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cd40lgP27548 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC10.84□□□□□ -0.67
Cd40lgP27548 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.84□□□□□ -0.67
Cd40lgP27548 Mir6927-201ENSMUST00000184494 71 ntBASIC10.84□□□□□ -0.67
Cd40lgP27548 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.84□□□□□ -0.67
Cd40lgP27548 Gm8956-201ENSMUST00000203939 825 ntBASIC10.84□□□□□ -0.67
Cd40lgP27548 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cd40lgP27548 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
Cd40lgP27548 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.84□□□□□ -0.67
Cd40lgP27548 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd40lgP27548 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd40lgP27548 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd40lgP27548 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd40lgP27548 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cd40lgP27548 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd40lgP27548 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cd40lgP27548 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cd40lgP27548 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Cd40lgP27548 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cd40lgP27548 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Cd40lgP27548 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.84□□□□□ -0.67
Cd40lgP27548 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cd40lgP27548 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.67
Cd40lgP27548 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Cd40lgP27548 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.83□□□□□ -0.68
Cd40lgP27548 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.83□□□□□ -0.68
Cd40lgP27548 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Cd40lgP27548 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.83□□□□□ -0.68
Cd40lgP27548 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.83□□□□□ -0.68
Cd40lgP27548 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.83□□□□□ -0.68
Cd40lgP27548 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cd40lgP27548 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Cd40lgP27548 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms