Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcf11G3X9Z4 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcf11G3X9Z4 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcf11G3X9Z4 Gm19013-201ENSMUST00000183895 1222 ntBASIC17.41■□□□□ 0.38
Pcf11G3X9Z4 Gm19014-201ENSMUST00000184828 1189 ntBASIC17.41■□□□□ 0.38
Pcf11G3X9Z4 Gm43249-201ENSMUST00000200464 458 ntBASIC17.41■□□□□ 0.38
Pcf11G3X9Z4 Gm26670-202ENSMUST00000226862 340 ntBASIC17.41■□□□□ 0.38
Pcf11G3X9Z4 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcf11G3X9Z4 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Pcf11G3X9Z4 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcf11G3X9Z4 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcf11G3X9Z4 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcf11G3X9Z4 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pcf11G3X9Z4 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Pcf11G3X9Z4 Gm37014-201ENSMUST00000194723 2253 ntBASIC17.41■□□□□ 0.38
Pcf11G3X9Z4 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcf11G3X9Z4 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcf11G3X9Z4 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Gm15036-201ENSMUST00000118880 400 ntBASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Gm12453-201ENSMUST00000121981 331 ntBASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Gm25830-201ENSMUST00000158923 132 ntBASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Gm24328-201ENSMUST00000175104 67 ntBASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 AC159376.1-201ENSMUST00000218504 630 ntBASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Gm11979-201ENSMUST00000119629 743 ntBASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Gm16165-201ENSMUST00000160140 795 ntBASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Gm4753-201ENSMUST00000188327 1255 ntBASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Gm9102-201ENSMUST00000219250 465 ntBASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 AC153962.2-201ENSMUST00000219417 550 ntBASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 AC154361.2-201ENSMUST00000224747 943 ntBASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcf11G3X9Z4 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcf11G3X9Z4 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcf11G3X9Z4 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Pcf11G3X9Z4 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Gm11502-201ENSMUST00000120917 1211 ntBASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Gm37365-201ENSMUST00000193109 409 ntBASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Gm20781-201ENSMUST00000193154 693 ntBASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Gm21736-201ENSMUST00000195399 693 ntBASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Gm7536-201ENSMUST00000077389 444 ntBASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Gm6641-201ENSMUST00000196100 1315 ntBASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 AC155245.1-201ENSMUST00000222266 1804 ntBASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcf11G3X9Z4 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pcf11G3X9Z4 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC17.38■□□□□ 0.37
Pcf11G3X9Z4 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcf11G3X9Z4 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pcf11G3X9Z4 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pcf11G3X9Z4 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcf11G3X9Z4 Gm17221-201ENSMUST00000163909 481 ntBASIC17.38■□□□□ 0.37
Pcf11G3X9Z4 Gm17073-201ENSMUST00000168069 556 ntBASIC17.38■□□□□ 0.37
Pcf11G3X9Z4 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcf11G3X9Z4 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcf11G3X9Z4 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC17.38■□□□□ 0.37
Pcf11G3X9Z4 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms