Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gm13916-201ENSMUST00000117368 628 ntBASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 Gm6548-201ENSMUST00000167498 1165 ntBASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 Gm37246-201ENSMUST00000192665 835 ntBASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 Gm9445-201ENSMUST00000207454 1285 ntBASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 Gm9785-201ENSMUST00000062642 1006 ntBASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC9.89□□□□□ -0.83
Cpsf4lE9Q2N0 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Gm45776-201ENSMUST00000212366 1522 ntBASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Gm6506-201ENSMUST00000119775 1136 ntBASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Gm11941-201ENSMUST00000119904 610 ntBASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 CT009713.8-201ENSMUST00000225448 560 ntBASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 AC112945.1-201ENSMUST00000226413 514 ntBASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Ntng1-201ENSMUST00000051253 327 ntBASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Rassf8-202ENSMUST00000058538 1131 ntBASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Gm9279-201ENSMUST00000223175 1606 ntBASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cpsf4lE9Q2N0 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms