Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Gm15236-201ENSMUST00000117309 379 ntBASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Gm14208-201ENSMUST00000119645 678 ntBASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Gm19187-201ENSMUST00000206781 892 ntBASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Gm5419-201ENSMUST00000119301 527 ntBASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Gm12164-201ENSMUST00000121695 551 ntBASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Gm26361-201ENSMUST00000158868 186 ntBASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Gm9136-201ENSMUST00000193368 454 ntBASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Rprl1-202ENSMUST00000198476 238 ntBASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Gm45598-202ENSMUST00000210719 986 ntBASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 CT030182.1-201ENSMUST00000225935 533 ntBASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a2Q9JLR1 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms