Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Ddx47Q9CWX9 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Gm7809-201ENSMUST00000153199 742 ntBASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Gm3890-201ENSMUST00000182416 207 ntBASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx47Q9CWX9 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ddx47Q9CWX9 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Gm19178-201ENSMUST00000217524 1819 ntBASIC12□□□□□ -0.49
Ddx47Q9CWX9 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx47Q9CWX9 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Gm13875-201ENSMUST00000120162 282 ntBASIC12□□□□□ -0.49
Ddx47Q9CWX9 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Gm27892-201ENSMUST00000185017 106 ntBASIC12□□□□□ -0.49
Ddx47Q9CWX9 Gm28882-201ENSMUST00000185504 314 ntBASIC12□□□□□ -0.49
Ddx47Q9CWX9 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ddx47Q9CWX9 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12□□□□□ -0.49
Ddx47Q9CWX9 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Gm43579-201ENSMUST00000202387 1307 ntBASIC12□□□□□ -0.49
Ddx47Q9CWX9 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx47Q9CWX9 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx47Q9CWX9 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx47Q9CWX9 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ddx47Q9CWX9 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.99□□□□□ -0.49
Ddx47Q9CWX9 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.99□□□□□ -0.49
Ddx47Q9CWX9 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ddx47Q9CWX9 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx47Q9CWX9 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx47Q9CWX9 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms