Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 Gm16071-201ENSMUST00000119589 793 ntBASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 Gm7150-201ENSMUST00000122032 981 ntBASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 Gm17826-201ENSMUST00000189720 798 ntBASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 Gm3551-201ENSMUST00000190750 664 ntBASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3b1Q99NB9 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Gm10752-201ENSMUST00000218348 729 ntBASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3b1Q99NB9 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Gm1848-201ENSMUST00000120711 789 ntBASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Gm8194-201ENSMUST00000159783 859 ntBASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Gm10731-201ENSMUST00000181171 448 ntBASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b1Q99NB9 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms