Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Gm14644-201ENSMUST00000116671 647 ntBASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Gm27320-201ENSMUST00000184892 109 ntBASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Gm8885-201ENSMUST00000189382 598 ntBASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Gm38241-201ENSMUST00000192641 898 ntBASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.37□□□□□ -0.59
Rnf111Q99ML9 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.37□□□□□ -0.59
Rnf111Q99ML9 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Gm11989-201ENSMUST00000117240 672 ntBASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Gm11439-201ENSMUST00000118598 409 ntBASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Gm11362-201ENSMUST00000118838 850 ntBASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Gm6963-201ENSMUST00000147879 379 ntBASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Gm37259-201ENSMUST00000193903 849 ntBASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Gm19187-201ENSMUST00000206781 892 ntBASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf111Q99ML9 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms