Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm25604-201ENSMUST00000158359 133 ntBASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Gm5706-201ENSMUST00000181525 993 ntBASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 CT573086.4-201ENSMUST00000226729 342 ntBASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Gm19680-201ENSMUST00000095050 1513 ntBASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Gm5700-201ENSMUST00000191483 989 ntBASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Gm37319-201ENSMUST00000193500 636 ntBASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Gm3318-201ENSMUST00000217604 1183 ntBASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Gm18968-201ENSMUST00000221319 862 ntBASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx6-1Q99MA9 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Gm11560-201ENSMUST00000117567 948 ntBASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Gm4034-201ENSMUST00000187674 480 ntBASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Gm6450-201ENSMUST00000200896 574 ntBASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Gm17931-201ENSMUST00000208132 634 ntBASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Gm3433-201ENSMUST00000210149 1058 ntBASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Gm6390-201ENSMUST00000215034 589 ntBASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Arhgef33-207ENSMUST00000224966 490 ntBASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx6-1Q99MA9 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms