Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Gm20482-202ENSMUST00000174729 825 ntBASIC10.49□□□□□ -0.73
Rft1Q8C3B8 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rft1Q8C3B8 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Gm22323-201ENSMUST00000103832 109 ntBASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Gm25043-201ENSMUST00000158604 212 ntBASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Gm27243-201ENSMUST00000183964 521 ntBASIC10.48□□□□□ -0.73
Rft1Q8C3B8 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rft1Q8C3B8 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rft1Q8C3B8 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms