Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Vps9d1Q8C190 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vps9d1Q8C190 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Vps9d1Q8C190 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Vps9d1Q8C190 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vps9d1Q8C190 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.98□□□□□ -0.65
Vps9d1Q8C190 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Vps9d1Q8C190 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vps9d1Q8C190 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Gm14832-201ENSMUST00000121289 322 ntBASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Gm14441-201ENSMUST00000121960 540 ntBASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vps9d1Q8C190 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Gm7722-201ENSMUST00000120646 741 ntBASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.96□□□□□ -0.65
Vps9d1Q8C190 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Gm17376-201ENSMUST00000166016 84 ntBASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Gm20482-202ENSMUST00000174729 825 ntBASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Vps9d1Q8C190 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.96□□□□□ -0.65
Vps9d1Q8C190 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Vps9d1Q8C190 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Vps9d1Q8C190 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Vps9d1Q8C190 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.96□□□□□ -0.66
Vps9d1Q8C190 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.96□□□□□ -0.66
Vps9d1Q8C190 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Vps9d1Q8C190 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Vps9d1Q8C190 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Vps9d1Q8C190 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Vps9d1Q8C190 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Vps9d1Q8C190 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Vps9d1Q8C190 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Vps9d1Q8C190 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.96□□□□□ -0.66
Vps9d1Q8C190 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Vps9d1Q8C190 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Vps9d1Q8C190 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms