Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Gm11500-201ENSMUST00000118237 601 ntBASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Gm14724-201ENSMUST00000118400 537 ntBASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Gm11783-201ENSMUST00000119549 885 ntBASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Gm2260-201ENSMUST00000184965 657 ntBASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Gm5714-201ENSMUST00000197343 566 ntBASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Gm6867-201ENSMUST00000219165 425 ntBASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trub1Q8C0D0 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.04□□□□□ -0.48
Trub1Q8C0D0 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Gm8815-201ENSMUST00000173809 620 ntBASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Gm45575-201ENSMUST00000210283 548 ntBASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Gm18212-201ENSMUST00000211678 889 ntBASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms