Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Gm22442-201ENSMUST00000157256 144 ntBASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Gm19009-201ENSMUST00000223072 823 ntBASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
Rd3Q8BRE0 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Gm11340-201ENSMUST00000119226 412 ntBASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Gm9192-201ENSMUST00000183221 985 ntBASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.4□□□□□ -0.42
Rd3Q8BRE0 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Rd3Q8BRE0 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rd3Q8BRE0 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rd3Q8BRE0 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rd3Q8BRE0 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Rd3Q8BRE0 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.43
Rd3Q8BRE0 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rd3Q8BRE0 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms